Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATTLPVQRHPRSLFPEFSELFAAFPSFAGLRPTFDTRLMRLEDEMKEGRYEVRAELPGVDPDKDVDIMVRDGQLTIKAERTEQKDFDGRSEFAYGSFVRTVSLPVGADEDDIKATYDKGILTVSVAVSEGKPTEKHIQIRSTN
4FEI Chain:A ((49-141))
------------------------------------PWTPAADWRDAGTHLDLLLDVPGVD-AGTLALAEDGGQLTVSGERPGTEH-LLRSERPSGRFVRELAFPEPVRPASGVASLAGGVLTVRFEKLRP-------------
General information:
TITO was launched using:
RESULT:
Template:
4FEI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46383 for 576 contacts (-80.5/contact) +
2D Compatibility (PS) -10488 + (NN) -6583 + (LL) 3020
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: -63984.0 ( -111.08 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_4FEI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FEI-query.scw
PDB file :
Tito_Scwrl_4FEI.pdb
: