Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLS-DVGSADDLTQETFLRAIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
4G97 Chain:A ((2-132))
------------------------TLSTRIAPHLPYLRRFSRALTGSQSSGDAYVAAALEALIADVGIFPEASSDRIGLYRLFCNLYK-------------------------------------------IAPLPRQAFLLVAVEGFNDHEAAEILEVDQAEFGRLLSTASG-------------
General information:
TITO was launched using:
RESULT:
Template:
4G97.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67933 for 772 contacts (-88.0/contact) +
2D Compatibility (PS) -11324 + (NN) -2911 + (LL) 4732
1D Compatibility (HY) -6400 + (ID) 1050
Total energy: -84886.0 ( -109.96 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_4G97.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G97-query.scw
PDB file :
Tito_Scwrl_4G97.pdb
: