Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAGPDRAHTSITLVA-YAV-PEPGWSAVIPAFNASEQGRGVQVITSYGA---------SADQSRGVADGKPADLVNFSVEPDIARLVKAGKVDK--DW------DAD------------ATKGIPFG-SVVTFVVRAGNPK--------NIRDWDDLLRPGIEVITPSPL---SSGS------AK-WNLLAPYAAKSD--GG---R---NNQAGIDFVNTLV--NEH-VKL--------RPGSGREATDVFVQGSGDVLISYENEAIATER--AGKPVQHV-TPPQ---T----FKIENPLAVVATSTHLGAATAFRNFQYTVQAQKLWAQ-A-GFRPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSITKIYLRATG |
| 4R9F Chain:A ((41-376)) | -----------------------------------------------------KQVVLTLWYPWAGPDGDAVVSLAKEYSKTHPNVQIKAQMVSGAGIAATQGGGQGKFLSAVAAGNPPDLVLYWGQDALPGLADQGAIIPLDDYLKDVDTSKFFEAAYNAMKYKGKIYGLPEMVNVRVLFWNKDLFKQAGLDPNTPPKTIAELDQMAAKLTKTKNGTIEQMGFIPWIGQGVPHVMAGVFGTSLVDSNGNPILSPDKNPQLLNLLKWEVSYSDKYGAMNINKFIAGMSQNSSQANDPFVLGKVAMMISGEWQINANKQYNPKLNFGVGPIPQAPGGKPMPSLMDGNTWMIPKGSKHPQEAMDFIKWTMDPQRIADTADKVYNIAPIVEA------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R9F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22276 for 1852 contacts (-12.0/contact) +
2D Compatibility (PS) -28075 + (NN) -12097 + (LL) 5532
1D Compatibility (HY) -6800 + (ID) 2150
Total energy: -65866.0 ( -35.56 by residue)
QMean score : 0.321
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