Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKSFYDAVGGAKTFDAIVSRFYAQVAEDEVLRRVYPEDDLAGAEERLRMFLEQYWGGPRTYSEQRGHPRLRMRHAPFRISLIERDAWLRCMHTAVASIDSETLDDEHRRELLDYLEMAAHSLVNSPF
2QRW Chain:G ((2-128))
-PKSFYDAVGGAKTFDAIVSRFYAQVAEDEVLRRVYPEDDLAGAEERLRMFLEQYWGGPRTYSEQRGHPRLRMRHAPFRISLIERDAFLRCMHTAVASIDSETLDDEHRRELLDYLEMAAHSLVNSPF
General information:
TITO was launched using:
RESULT:
Template:
2QRW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71537 for 866 contacts (-82.6/contact) +
2D Compatibility (PS) -14161 + (NN) -11676 + (LL) 208
1D Compatibility (HY) -16800 + (ID) 6300
Total energy: -120266.0 ( -138.88 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_2QRW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QRW-query.scw
PDB file :
Tito_Scwrl_2QRW.pdb
: