Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDIGAPVTVQVAVDPPYPVVIGTGLLDELEDLLADRHKVAVVHQPGLAETAEEIRKRLAGKGVD------AHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAATDVAGFAAATWLRGVSIVHLPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPLAVLVDLATLQTLPRDEMICGMAEVVKAGFI-ADPVILDLIEADPQAALDPAGDVLPELIRRAITVKAEVVAADEKESELREILNYGHTLGHAIERRERYRWRHGAAVSVGLVFAAELARLAGRLDDATAQRHR-TILSSLGLPVSYDPDA-LPQLLEIMAGDKKT-RAGVLRFVVLDGLAKPGRMVGPDPGLLVTAYAGVCAP |
1XAI Chain:B ((40-321)) | ----------------------------------------------------EYVNQYFANKFDDILSYENVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFKQILSGYAEVYKHALLNGESATQDIEQHFKDREILQSLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVEY--YHKIPHGHAVMVGIIYQFIVAN--ALFDSKHDISHYIQYLIQLGYPLDMITDLDFETLYQYMLSDKKNDKQGV--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102249 for 2158 contacts (-47.4/contact) +
2D Compatibility (PS) -29418 + (NN) -10111 + (LL) 5964
1D Compatibility (HY) -24000 + (ID) 5050
Total energy: -164864.0 ( -76.40 by residue)
QMean score : 0.443
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