Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLD----------PNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVIS-EHRLVGIVTEADIARHLPEHAIVQFVKAICSPMALAS
4GQW Chain:A ((75-227))
-YTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDL-LALD----TWKTFNAVQKL--GKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ------------------
General information:
TITO was launched using:
RESULT:
Template:
4GQW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81229 for 869 contacts (-93.5/contact) +
2D Compatibility (PS) -13068 + (NN) -7404 + (LL) 2444
1D Compatibility (HY) -11200 + (ID) 1350
Total energy: -111807.0 ( -128.66 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_4GQW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GQW-query.scw
PDB file :
Tito_Scwrl_4GQW.pdb
: