Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRPLHAFEVVATRHLAPHMVRVVLGGSG-------FDTFVPSDFTDSYIKLVFVDDDVDVGRLPRPLTLDSFADLPTAKRPPVRTMTVRHVDAAAREIAVDIVL------HGEHGVAGPWAA-GAQRGQPIYLMGPGGAYAPDP-----AADWHLLAGDESAIPAIAAALEALPP---DAIGRAFIEVAGPDDEIG---LT----APDAVEVNWVYRGGRADLVPEDRAGDHAPLIE-AVTTTAWLPGQVHVFIHGEAQAVMHNLRPYVRNERGVDAKWASSISGYWRRGRTEEMFRKWKKELAEAEAGTH |
| 4G1V Chain:A ((147-396)) | ---PGWKPFEITAKEYVASDIVEFTVKPKFGSGIELESLPITP----GQYITVNTHPIRQ------------------ENQYDALRHYSLCSAST-KNGLRFAVKMEAARENFP-AGLVSEYLHKDAKVGDEIKLSAPAGDFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKCNPNRPIYWIQSSYDEKTQAFKKHVDELLAECANVDKIIVHTDTEP-------------LINAAFLKEK-SPAHADVYTCGSLA-FMQAMIGHLKE-LEHR-DDMIHYEPFGPKMST------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131401 for 1706 contacts (-77.0/contact) +
2D Compatibility (PS) -23857 + (NN) -10653 + (LL) 3696
1D Compatibility (HY) -7200 + (ID) 1550
Total energy: -170965.0 ( -100.21 by residue)
QMean score : 0.366
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