Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVTVYTKPACVQCSATSKALDKQGIAYQKVDISLDSEARDYVM-ALGYLQAPVVVAGNDHWSGFRPDRIKALAGAALTA
2KHP Chain:A ((7-70))
-DVIIYTRPGCPYCARAKALLARKGAEFNEIDASATPELRAEMQERSGRNTFPQIFIGSVHVGGC---------------
General information:
TITO was launched using:
RESULT:
Template:
2KHP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36689 for 403 contacts (-91.0/contact) +
2D Compatibility (PS) -7163 + (NN) -3546 + (LL) 1412
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -48036.0 ( -119.20 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_2KHP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KHP-query.scw
PDB file :
Tito_Scwrl_2KHP.pdb
: