Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTWPAPTAPTPVRATVTVPGSKSQTNRALVLAALAAAQGRGASTISGALRSRDTELMLDALQTLGLRVDGVGSELTVSGRIE---PGPGARVDCGLAGTVLRFVPPLAALGSVPVTFDGDQQARGRPIAPLLDALRELGVAVDG-T---GLPFRVRGNGSLAGGTVAIDASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTPNRWQVRPGP-VAARRWDIEPDLTNAVAFLSAAVVSG-GTVRITGWPRVSVQPADHILAILRQLNAVVIHADSS---------LEVRGPTGYDGFDVDLRAV---GELTPSVAALAALASPGSVSRLSGIAHLRGHETDRLAALSTEINRLGGTCRETPDGLVITATPLR-P-GIWRAYADHRMAMAGAIIGLRV-AGVEVDDIAATTKTLPEFPRLWAEMVGPGQGWGYPQPRSGQRARRATGQGSGG |
| 3RMT Chain:A ((4-439)) | -ENKTVIPHAKGLKGTIKVPGDKSISHRAVMFGALA----KGTTTVEGFLPGADCLSTISCFQKLGVSIEQAEERVTVKGKGWDGLREPSDILDVGNSGTTTRLILGILSTLPFHSVIIGDESIGKRPMKRVTEPLKSMGAQIDGRDHGNLTPLSIRGG-QLKGIDFHS-PVASAQMKSAILLAGLRAEGKTSVTEP----A--KTRDHTERMLEAFGVNIEKD-GLTVSIEGGQMLTGQHVVVPGDISSAAFFLVAGAMVPHSRITLTNVGINPTR--AGILEVLKQMGATLAMENERVQGGEPVADLTIETS-VLQGVEIGGDIIPRLIDEIPIIAVLATQAS--GRTVIKD-----VKETNRIDTVVSELTKLGASIHATDDGMIIEGPTPLKGGVTVSSHGDHRIGMAMAIAALLAEKPVTVEGTEAIAVSYPSFFDHLDRLKSEAENLYF------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280500 for 3574 contacts (-78.5/contact) +
2D Compatibility (PS) -44447 + (NN) -28096 + (LL) 628
1D Compatibility (HY) -20800 + (ID) 4850
Total energy: -378065.0 ( -105.78 by residue)
QMean score : 0.489
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