Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDVDWNMLRGNATQAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVENVSYGLTLCAECAVVCALHSTGGGRLLALA-CVDGHGSVLMPCGRCRQVLLEHGGSELLI----DHPVRPRRLGDLLPDAFGLDDLPRERR
2FR5 Chain:C ((21-143))
-----------SSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAERTAIQKAISEGYKDFRAIAISSDLQEEFISPCGACRQVMREFGTDWAVYMTKPDGTFVVRTVQELLPASFGPEDLQ----
General information:
TITO was launched using:
RESULT:
Template:
2FR5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77437 for 859 contacts (-90.1/contact) +
2D Compatibility (PS) -13327 + (NN) -7677 + (LL) 900
1D Compatibility (HY) -7200 + (ID) 2450
Total energy: -107191.0 ( -124.79 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_2FR5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FR5-query.scw
PDB file :
Tito_Scwrl_2FR5.pdb
: