Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTPTGSRRIFSGVQPTSDSLHLGNALGAVAQWVGLQDD-HDAFFCVVDLHAITIPQDP-EALRRRTLITAAQYLALGIDPGRATIFVQSQVPAHTQLAWVLGCFTGFGQASRMTQFKD-KSARQGSEATTVGLFTYPVLQAADVLAYDTELVPVGEDQRQHLELARDVAQRFNSRFPGTLVVPDVL---IPKMTAKIYDLQDPTSKMSKSAGTDAGLINLLDDPALSAKKIRSAVTDSERDIRYDPDVKPGVSNLLNIQSA--VTGTDIDVLVDGY--AGHGYGDLKKDTAEAVVEFVNPIQARVDELTADPAELEAVLAAGAQRAHDVASKTVQRVYDRLGFLL |
| 2G36 Chain:A ((14-340)) | --------RILSGMRPTG-KLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLACGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEI-------DLSTAGFLIYPVLQAADILIYKAEGVPVGEDQVYHIELTREIARRFNYLYDEVFPEPEAILSRVPKLPG------TDGRKMSKSYGN---IINLEISEKELEQTILRMMTDPARVRRSDPG-NPENCPVWKYHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDEDPHYVDDVIMEGTKKAREVAAKTMEEVRRAMNLMF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139474 for 2396 contacts (-58.2/contact) +
2D Compatibility (PS) -33534 + (NN) -14975 + (LL) 836
1D Compatibility (HY) -26400 + (ID) 5400
Total energy: -218947.0 ( -91.38 by residue)
QMean score : 0.562
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