Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK
1WNR Chain:A ((1-94))
----MIKPLGDRVVVKRI-------------------PQKGKVIAVGTGRVLENGQ-RVPLEVKEGDIVVFAKYGGTEIEIDGEEYVILSERDLLAVLQ-
General information:
TITO was launched using:
RESULT:
Template:
1WNR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26934 for 501 contacts (-53.8/contact) +
2D Compatibility (PS) -8170 + (NN) -1034 + (LL) 1972
1D Compatibility (HY) -10400 + (ID) 2200
Total energy: -46766.0 ( -93.35 by residue)
QMean score : 0.687
(partial model without unconserved sides chains):
PDB file :
Tito_1WNR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WNR-query.scw
PDB file :
Tito_Scwrl_1WNR.pdb
: