Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSRAPRNLAVSSPSAQVTGRMVQNGENLFQFRREGPQVQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAVKDIEALKTG-AIGY-----EPADITDEEQTLRVVDAATAWHGRLHGVVHCAGGSQTIGPITQIDS---QAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT-HRWFGAYGVTKSAVDHMMKLAADELGPSWVRVNSIRPGLIRTDLVVPVTESPELSADYRVCTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSPMLEPVFGADGLRGVVG |
3RIH Chain:C ((35-289)) | --------------------------------------VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAART--VVDA----FGALDVVCANAG----IFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGE--EYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVLPESPD------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133994 for 2073 contacts (-64.6/contact) +
2D Compatibility (PS) -26291 + (NN) -9732 + (LL) 3164
1D Compatibility (HY) -15600 + (ID) 4650
Total energy: -187103.0 ( -90.26 by residue)
QMean score : 0.500
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