Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQLPRVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNAPVSVSATTTDGLGLTGR-GEGLAAIATALVVSLR
1IV2 Chain:D ((2-138))
-----RIGYGEDSHRLEEGRPLYLCGLLIPSPVGALAHSDGDAAMHALTDALLSAYGLGDIGLLFPDTDPRWRGERSEVFLREAMRLVEARGAKLLQASLVLTLDRPKLGPHRKALVDSLSRLMRLP-------QDRIGLTFKTSEGLA-----------
General information:
TITO was launched using:
RESULT:
Template:
1IV2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97795 for 1012 contacts (-96.6/contact) +
2D Compatibility (PS) -15270 + (NN) -14341 + (LL) 2356
1D Compatibility (HY) -8000 + (ID) 3250
Total energy: -136300.0 ( -134.68 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_1IV2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IV2-query.scw
PDB file :
Tito_Scwrl_1IV2.pdb
: