Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKFKGALVVGALRLFALLPWRAVQGVGAGIGWLMWKLPNRSREVVRINLSKCFPELSETELEKLVGQSLMDIGRTLTESACAWIWPPEKSLRYIREVEGMEVLEEALASGDGLVGITSHLGNWEVLNHFYCSYAKPIIFYRPPKLKAVDELLKKQRVQLGNR---VAPSTPEGILSVIKEV----KKGGCVGIPADPEPARTAGLFVPYLGTTALISKFVPQLLSRGKARGVFFHAVRLPDGSGYKVILEAAPADMYDKDLEVSVAAMSRELAKYVRAYPSQYMWSMKRFKNRPDGEKKWY |
2RH3 Chain:A ((82-202)) | -------------------------------------------------------------------------------------------------------IQVFLSARPPAPEVSKIYDNLILQY----SPSKSLQMILRRALGDFENMLADGSFRAAPKSYPIPHTAFEKSIIVQTSRMFPVSLIEAARNHFDPLGLETARAFGHKLATAALACFFAREKATNS-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17095 for 786 contacts (-21.7/contact) +
2D Compatibility (PS) -11511 + (NN) 1353 + (LL) 14120
1D Compatibility (HY) -800 + (ID) 900
Total energy: -14833.0 ( -18.87 by residue)
QMean score : 0.109
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