Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVYVGPVGDHGWTYQHELGRRELVEHFGDKVKTSFVENVAEGADAERVIRNLAKDGYGLVFTTSFGYMN--PTAKVARQFPKVTFEHATGYKR--DRNLGTYLSRSYEGRYVGGFLAAKM-T-----RSHKIGYIASFP-IPEVIRDINAIQLALDKYDPQAELKV---------MWVSTWFDPGKEADAANALID-----QGVDVVFQHTDSPA--PIQAAERRG-------VYAV-GYASDMQH---FGPKTVLTSIVNDWGPHYIRSAQAVMDGTWKSEDFWGGLAESTVVLPLNQEVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSGKERFAAGVSATKADLASMNYYVEGIKADLPK |
| 3UUG Chain:A ((2-276)) | --------------------------------DKGSVGIAMPTK--SSARWIDDGNNIVKQLQEA-G-YKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGE-QGIKVIAYDRLIRNSGDVSYYATFDNFQVGVLQATSITDKLGLKDGKGPFNIELFGGSPDDNNAFFFYDGAMSVLKPYIDSGKLVVKSGQMGMDKVGTLRW-DPATAQARMDNLLSAYYTDAKVDAVLSPYDGLSIGIISSLKGVGYGTKDQPLPVVSGQDAEVPSVKSIIAGEQYSTIFKDTRELAKVTVNMVNAVMEGKEPEVNDTKTYENGVKVVPSYLLKPVAVTKENYKQVLVDGGYYKEDQLK------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92387 for 1992 contacts (-46.4/contact) +
2D Compatibility (PS) -25524 + (NN) -3619 + (LL) 5408
1D Compatibility (HY) -4400 + (ID) 1550
Total energy: -122072.0 ( -61.28 by residue)
QMean score : 0.434
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