Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVSSASLAGKVAFVQGGSRGIGAAIVRRLAAEGASVAFTYVSSADKSRALAAELEGAGASILALHADSADAAALVAAVDEAAARFGRIDILVNNAAVLALGSVEELPLADFERTLAINVRSVFVATQAAVKHMGDG---GRVISIGSTNAERMPFAGGATYAMSKSALVGLTKGLARDLGPRGITVNNVQPGPVDTDMNPD---DGDFAEALKGLMALPRYARSEEIASFVAYLAGPEAAYITGASLTIDGGFSA
1RWB Chain:A ((5-251))
-------LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVH-EKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL
General information:
TITO was launched using:
RESULT:
Template:
1RWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126184 for 2106 contacts (-59.9/contact) +
2D Compatibility (PS) -27008 + (NN) -18625 + (LL) 576
1D Compatibility (HY) -18800 + (ID) 3850
Total energy: -193891.0 ( -92.07 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_1RWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RWB-query.scw
PDB file :
Tito_Scwrl_1RWB.pdb
: