Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
1J59 Chain:B ((11-205))
------------LEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFE-EG--QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVV----
General information:
TITO was launched using:
RESULT:
Template:
1J59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124661 for 1385 contacts (-90.0/contact) +
2D Compatibility (PS) -20845 + (NN) -3895 + (LL) 1356
1D Compatibility (HY) -24000 + (ID) 6600
Total energy: -178645.0 ( -128.99 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_1J59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J59-query.scw
PDB file :
Tito_Scwrl_1J59.pdb
: