Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDSRQ---SAMVKLFLASYDDFKARLKRRLGSEDLACDVLHETYLRVDRLDDA-LE--VKKPQAYLFRIALNIAADRREGDARLLTGEEVAELLQVADEGLDPERIVGGHAEIRRLLEALCELPARRRQILIASRLEETPHAEISRRFGISTRTVEKELKAALWFCAERLERKVIQRFGPGAGKPS |
| 1SIG Chain:A ((366-446)) | -SIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQ--------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SIG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1304 for 482 contacts (2.7/contact) +
2D Compatibility (PS) -8330 + (NN) -6668 + (LL) 8984
1D Compatibility (HY) 1200 + (ID) 450
Total energy: -3960.0 ( -8.22 by residue)
QMean score : 0.354
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