Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRASFVLLALSCAAPLLSLAEPLRFAGDDGCPYLCPGTPQRPGYLVEALSQVLR---EPPHFDSL-PWPRAVQMVRDGHRDGLVGA-YGL----DGLRVGSEPIGWVGLAFYTRHDSDWHYSGDASLLGQRLGLAQGYVNNPRFEAWRSQAGDDDLHLQVLGGERVLPRNLQKLLLGRIDVLLEDRDIIEHYLEHHPQLAGQIRRAGELPGRQPLHVGLSPHLPEVDARLAELDEGLRQLRREGTLKVLGERYRLSFE |
| 2PYY Chain:A ((4-223)) | ----------------------PLLVATRVIPPFVLSN---LSGFSIDLWRSIATQIGIESKLIEYSSVPELISAIKDNKVNLGIAAISITAEREQNFDFS-LPIFASGLQIMVRN---GDIRSIDDLPGKVVATTAGSTAATYLRE----HH-----ISVLE-VPKIEEAYKALQTKKADAVVFDAPVLLFYAANE-GK-GKVEIVGSILREESYGIILPNN----SPYRKPINQALLNLKENGTYQSLYDKWFDP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90930 for 1639 contacts (-55.5/contact) +
2D Compatibility (PS) -21636 + (NN) -9744 + (LL) 3084
1D Compatibility (HY) -9200 + (ID) 1500
Total energy: -129926.0 ( -79.27 by residue)
QMean score : 0.347
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