Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILPVPMLAAGLALLPSFAQAEFFADGKAGLELRNFYFNRDYRQPGASQSYSEEWAQGFLLRYESGYTEGLFG-LGVDALGLLGVRLD--SSPERSGSGLLPYSTSDRRAAHDYSSLG-LTAKLRVSHSTLKIGTLMPRLPVVQFNDTRLHPQTFQGGLLEVNEIDGLALQFGQLRQVKQRDSTNAEDLGITRGNKRNVLAGRHPGSDRFDFAGGTYRWSERLSSSYHYANLEDFYRQHHLGVQHLLPLADDQSLKSDIRWARSTDEGG---SRVNNRALNALFTYRLGGHAFGLGYQRMSGDSGFAY----LAGT-DPYLVNFVQIGDFANKDERSWQLRYDYDFAAIGLPGLTFMSRYLRGEHIDLLD------------GGGRGKEWERDTDIAYLVQSGPLKNLGIKLRNGTFRSDF---GNDIDETRLIVSYALPLW |
| 3SY7 Chain:A ((4-420)) | --------------VSDQAEAKGFIEDSSLDLLLRNYYFNRD---------DRVDWTQGFLTTYESGFTQ---GTVGFGVDAFGYLGLKLDGT-------------------DDYSRAGGA-VKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGVQLQSSEFEGLDLEAGHFTE----------ELYATYA---------GETAKSADFIGGRYAITDNLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTNDEGKAKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFGGAGGDSIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRANADQGEGDQNEFRLIVDYPLSIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9178 for 2722 contacts (-3.4/contact) +
2D Compatibility (PS) -35691 + (NN) 371 + (LL) 3192
1D Compatibility (HY) -21200 + (ID) 7050
Total energy: -69556.0 ( -25.55 by residue)
QMean score : 0.216
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