Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSHSPIATVAQALRRAERILVITGAGLSADSGMPTYRGLGGLYNGRTEEGLPIEAALSGPMLRRDPALCWKYLAELGKACLAARPNAGHEAIAE----LQKHKPECWVLTQNIDGFHRQAGSPAERLIEIHGELAPLYCQSCGA-------------------ESGGLEEHLHGQLPPRC--AACGGVLRPPVVLFEEMLPEEAIDTLYRELRKGFDAVLVVGTTA-SFP-YIVEPVLRTRQAGGFTAEVNPGVTDLSERVDVKMTGRALDIMPQVVSHIYR |
4UUB Chain:A ((12-271)) | -----DLTAFREHFAKAKHIAIITGAGVSAESGVPTFRGPGGFWRKWQAQDLATPEAFS-----RDPSLVWEFYHYRREVMRSKMPNPAHLAIAECEARLGQQGRSVVIITQNIDELHHRAGS--KHVYEIHGSLFKTRCMSCGEVKANHKSPICPALDGKGAPDPNTKEARIPVELLPRCERKSCNGLLRPHVVWFGETLDSDILTAVERELEKC-DLCLVVGTSSIVYPAAMFAPQVASR--GVPVAEFNMECTPATQ--KYHFEGPCGSTLPPALE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99335 for 1746 contacts (-56.9/contact) +
2D Compatibility (PS) -25242 + (NN) -14168 + (LL) 1460
1D Compatibility (HY) -17600 + (ID) 4300
Total energy: -159185.0 ( -91.17 by residue)
QMean score : 0.443
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