Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPREHGKRSIDNETRSALKRQRPAVIWLTGLSGAGKSTIASALELALFEQKK-HTFLLDGDDLRLGLCRNLGYSDEDRTENIRRIAEVAKILLEAGLIVIVATISPFSRDRRLSRELIGIEH--------FIEVFVDTPLSECERRDPKGLYRKARSGKIENFTGIDSIYETPAQPNITIDTLSEDPDLAVKRIISYLETNQPA
1M7G Chain:C ((17-202))
---------------RTELRNQRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVAKLFADSNSIAITSFISPYRKDRDTARQLHEVATPGEETGLPFVEVYVDVPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVHVKNYELPVQDAVKQIIDYLDTKGYL
General information:
TITO was launched using:
RESULT:
Template:
1M7G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107558 for 1390 contacts (-77.4/contact) +
2D Compatibility (PS) -19736 + (NN) -10537 + (LL) 404
1D Compatibility (HY) -13600 + (ID) 4400
Total energy: -155427.0 ( -111.82 by residue)
QMean score : 0.645
(partial model without unconserved sides chains):
PDB file :
Tito_1M7G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M7G-query.scw
PDB file :
Tito_Scwrl_1M7G.pdb
: