Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKPTVRVLALLELLQSHGQLSGSELARRLEVDGRTLRRYIVALEELGIPISAERGRHGGYRLVAGFKLPPLMFSAEETLAVSLGLLAVRSLGLGESELALESA-QAKLSRVMPVALRRRLVALRETASLDLAR-ARAGTSVAALATLAEAAQVRARVEFRYRDPQGAETLRQLDPYGLAYRNGCWYV-SGFCHLRQALRSFRLDRLDAPRMLAERFERPADFDTLRHLRESFARMPR-AYPVE-ILMRAAREQVVAVLGEPLGLLAEVDGGTLLRASTDDLDWFARRLCGLPFDFEVRQPLELREPLRRQAERVLRNLGQEEASDHR |
| 3SPE Chain:A ((7-286)) | -ANPS-RLIVAIEIVEDEIPLT--------KVDGLKARIIL---------IEDNTSEVGTQRVLPGTLVSD----KDGSQSLVYPLFEAPVSFFG--KLGDSNGMRVWSTTTADIE------------EFDEAAMAKFKTR-----------QFRIQLIEKPESPVIVKTADQQDYLNITFDKGVYSDMY---NADLYVGDVLVDSYSDDGVVSGLSPLYSPFSQFYVYHENIDLVRQMIYDTEMRVNPAAAAHTTA--------PGEIDFLTFLAVDGDPYQG-----------IQVLGPLDGGITLGKDG-----NIYASGGTDG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SPE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30771 for 1919 contacts (-16.0/contact) +
2D Compatibility (PS) -24710 + (NN) 10122 + (LL) 7236
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -49173.0 ( -25.62 by residue)
QMean score : 0.139
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