Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLPFATIPATERNSAAQHQDPSPMSQPFDLPALASSLADKSPQDILKAAFEHFG-DELWISFSGAEDV-VLVDMAWKLNRNVKVFSLDTGRLHPETYRFIDQVREHYGIAIDVLSPDPRLLEPLVKEK-GLFSFYRDGH-GECCG----IRKIEPLKRKLAGVRAW-ATGQRRDQSPGTRSQVAVLEIDGAFSTPEKPLYKFNPLSSMTSEEVWGYIRMLELPYNSLHERGYISIGCEPCTRPVLPNQHEREGRWWWEEATHKECGLHAGNLISKA |
3FIU Chain:A ((18-189)) | -------------------------------------------NWLSDSCMNYPAEGFVIGLSGGIDSAVAASLAVKTGLPTTALILPSDNNQHQDMQDALELIEMLNIEHYTISIQPA-YEAFLASTQSFT-------QLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEWY---MGYFTK-F-------GDGAADILPLVNLKKSQVFELGKYLDVPKNILDKAPSAGLWQGQTDEDEMGVTYQEIDDFLDGKQVSAKALERINFWHNRS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -66918 for 1156 contacts (-57.9/contact) +
2D Compatibility (PS) -16663 + (NN) -4546 + (LL) 2300
1D Compatibility (HY) -7200 + (ID) 1150
Total energy: -94177.0 ( -81.47 by residue)
QMean score : 0.424
|
|
|