Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNAMALTLAGLLAAPSLGFAAAPDAVMVFARQGDKGSVSVGDKHFRTQAFKVRLVNAAKSEISLKNSCLVAQSAAGQSFRLDTVDEELTADTLKPGASVEGDAIFASEDDAVYGASLVRLSDRCK
2H2M Chain:A ((1-108))
-----------MAAGELEGGKPLSGLLNALAQDTFHGYPGITEELLRSQLYPEVPPEEFRPFLAKMRGILKSIASADMDF--NQLEAFLTAQTKKQGGITSDQAAVISK---FWKSHKTKIRES--
General information:
TITO was launched using:
RESULT:
Template:
2H2M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10129 for 721 contacts (-14.0/contact) +
2D Compatibility (PS) -10822 + (NN) 2316 + (LL) 1452
1D Compatibility (HY) 0 + (ID) 850
Total energy: -18033.0 ( -25.01 by residue)
QMean score : 0.223
(partial model without unconserved sides chains):
PDB file :
Tito_2H2M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H2M-query.scw
PDB file :
Tito_Scwrl_2H2M.pdb
: