Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTRTSPAPAGLLRPSLHCLAFAVALGSAGAALAKDVTWEDIANDDKTTGDVLQYGMGTHAQRWSPLKQVNADNVFKLTPAWSYSFGDEKQRGQESQAIVSDGVIYVTASY-SRLFALDAKT-GKRLWTYNHRLPDDIRP--CCDVVNRGAAIY-GDK-----VFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDD-RNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHG-KAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGM------GFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLPSWDNRTASR |
| 2D0V Chain:D ((23-563)) | ------------------------------------------------------------SNNYSTSTQINVDNVKQLKHAWSFSTGE--LHGHEGAPLVIGDVMYVHSSFPNKTFALDLNDPGHILWQHSPKQDPAARSVACCDLVNRGLAYWPGDDKTPSLIIKTQLDGHLVALNAKTGEEFWKVENGDIKVGQTLTQAPYVVHD------LAIVGSSGAELGVRGHVTAYNVRTGEQAW-RYYATGPDAEIGLADDFNSAN---PHYGQKGLGTATWEGDAWKIGGGTNWGWYAYDPAANLIYYGSGNPAPWNETMRPG--------DNKWTMTITARDADTGKMKFGYQKTPHDEWDFAGVNVIMLSEQTDKTGKKRKLLTHPDRNGIVYTLDRENGDLISADKLDDTVNVFKTVDLKTGLPVRD-------PEYGTRMDHKGTDICPSAMGYHNQGHDSYDPQKQLFFMGINHICMDWEPFMLPYRAGQFFVGATLWMYPGPKGDRQNYLGLGQIKAYNAITNEYKWQHMERFSVWGGTLATAGNLVFYGTLDGFLKARNSDTGELVWKHKLPSGVIGYPMTYEHKGVQYIAVMSGVGGWPGV--GLVFDLQDPTAGLGAVGAFKNLQNYTQMGGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98051 for 4924 contacts (-19.9/contact) +
2D Compatibility (PS) -56457 + (NN) -34027 + (LL) 3708
1D Compatibility (HY) -25200 + (ID) 9700
Total energy: -219727.0 ( -44.62 by residue)
QMean score : 0.550
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