Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------MIRCRNCGERPASEGHICMVCKRRSDIDPYKALIAM----ALLVYCGVSLAAYLKPH--MPAPPPTAGSSVQPAEELAQRARQATLEQRGI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4D2I Chain:A ((1-476)) | MIIGYVIGQATTQEALILAERPVRLGTYVVLEYDNVKALGLITNVTRGSPLLDDN--------MNDIEIVQRLKQFNNSIPVYTKAKVKLLCDMNNHFLMPDIPPFAGT---PAREAEDEELKSIYSQDGQIRIGSLIGKNVEVKLNINSFARHLAILAATGSGKSNTVAVLSQRISELGGSVLIFDYHGEYYDSDIKNLNRIEPKLNPLYMTPREFSTLLEIRENAIIQYRILRRAFIKVTNGIRAALAAGQIPFSTLNSQFYELMADALKDEVLNKFEEFMDRYSNVIDLTSSDIIEKVKRGKVNVVSLTQLDEDSMDAVVSHYLRRILDSRKDFKRSKNSGLKFPIIAVIEEAHVFLSKNENTLTKYWASRIAREGRKFGVGLTIVSQRPKGLDENILSQMTNKIILKIIEPTDKKYILESSDNLSEDLAEQLSSLDVGEAIIIGKIVKLPAVVKIDMFEGKLLGSDPDMIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6182 for 300 contacts (-20.6/contact) +
2D Compatibility (PS) -7883 + (NN) -2277 + (LL) 1208
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -17684.0 ( -58.95 by residue)
QMean score : 0.272
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