Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRAINDPGNEDPGSLLETDADALLGGAAAQAPEERCRLAAQACIRACERYLALCTES----SREQRQHAGDCADLCRLAALLLERRSPWAPAACELAARYALACAERCDGDEPLERECAGACRRFVEACRPLLPA
2Q00 Chain:A ((2-123))
---------------SISTSAEVYYEEAEEFLSKGDLVQACEKYYKAAEEAIKLLVIENNLKEITNNVKGRWKSENLFKASKLLRSNNTEIPILWKSAWTLHVEGFHELSLNEKEVKKLKEDVRKLVIFAVNSLE-
General information:
TITO was launched using:
RESULT:
Template:
2Q00.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48564 for 915 contacts (-53.1/contact) +
2D Compatibility (PS) -12887 + (NN) -9462 + (LL) -8
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -74521.0 ( -81.44 by residue)
QMean score : 0.667
(partial model without unconserved sides chains):
PDB file :
Tito_2Q00.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q00-query.scw
PDB file :
Tito_Scwrl_2Q00.pdb
: