Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNAYLSDQPVRLSPLRDEQGNQPRFGLLLEPGRPGMHVGELPAQWLKGLARSHH------LLLLRGFAAFADAE---------------------SLTRYCHDFGEVMLWP----FGAVLELVEQEGAEDHI--FANNYVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLADSSELELWRRASGRYQRSAA----HYSSRSAAPIVERHPRREFPILRFCEPPVEGDASFINPSEFHYDGIAPEQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFAHR---APRHLRRVHIHAE----------PALRNPHLQRD |
1DS1 Chain:A ((2-324)) | TSVDCTAYGPELRALAARLPRTPRADLYAFLDAAHTAAASLPGALATALDTFNAEGSEDGHLLLRGLPVEADADLPTTPSSTPAPEDRSLLTMEAMLGLVGRRLGLHTGYRELRSGTVYHDVYPSPGAHHLSSETSETLLEFHTEMAYHRLQPNYVMLACSR-ADHERTAATLVASVRKALPLLDERTRARLLDRRMPCCVDVAFRGGVDDPGAIAQVKPLYGDADDPFLGY-------DRELLAPE--------DPADKEAVAALSKALDEVTEAV--YLEPGDLLIVDNFRTTHARTPFSPRWDGKDRWLHRVYIRTDRNGQLSGGERAGDVVAFTPRG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101846 for 2152 contacts (-47.3/contact) +
2D Compatibility (PS) -28539 + (NN) -5665 + (LL) 808
1D Compatibility (HY) -6400 + (ID) 2750
Total energy: -144392.0 ( -67.10 by residue)
QMean score : 0.370
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