Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------------------------MTSVFDR-DDIQFQVVVNHEEQYSI-------WPEYKEIPQGWRAAGKSGLKKDCLAYIEEV---WTDMRPLSLRQHMDKAAG
4HR1 Chain:A ((3-120))
FNGAQTVIQKISWLRTAIAFLKGYMETTGATKKELEQVEKLKERVDEIATAVNWDVYAQYARGDFNLLSDDEYKEIQKALLVLED--IKEQIIVEMLRVGLAQGQMGTLKISDYLDSLDS
General information:
TITO was launched using:
RESULT:
Template:
4HR1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65 for 328 contacts (-0.2/contact) +
2D Compatibility (PS) -7354 + (NN) 111 + (LL) -200
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -12708.0 ( -38.74 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_4HR1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HR1-query.scw
PDB file :
Tito_Scwrl_4HR1.pdb
: