Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTYFDIPHRLVGKALYESYYDHFGQMDILSDGSLYLIYRRATEHVGGSDGRVVFSKLEGGIWSAPTIVAQAGGQDFRDVAGGTMPSGRIVAASTVYETGEVKVYVSDDSGVTWVHKFTLARGGADYNFAHGKSFQVGARYVIPLYAATGVNYELKWLESSDGGETWGEGSTIYSGN----------TPYNETSYLPVGDGVILAVARVGSGA------GGALRQFISLDDGGTWTDQGNVTA------QNG-DSTDILVAP--SLSYIYSEGGTPHVVLLYTNR----TTHFCYYRTILLAKAVAGSSGWTERVPVYSAPAASGYTSQVVLGGRRILGNLFRETSSTTSGAYQFEVYLGGVPDFESDWFSVSSNSLYTLSHGLQRSPRRVVVEFARSSSPSTWNIVMPSYFNDGGHKGSGAQVEVGSLNIRLGTGAAVWGTGYFGGIDNSATTRFATGYYRVRAWI |
| 1W0P Chain:A ((581-759)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------NVMSIYSDDGGSNWQTGSTLPIPFRWKSSSILETLEPSEADMVELQNGDLLLTARLDFNQIVNGVNYSPRQQFLSKDGGITWSLLEANNANVFSNISTGTVDASITRFEQSDG--------SHFLLFTNPQGNPAGTNGRQNLGLWFSFDE--G-VTWKGPIQL--VNGASAYSDIYQLDSENAIVIVETDN-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64296 for 1017 contacts (-63.2/contact) +
2D Compatibility (PS) -16753 + (NN) -8599 + (LL) 14064
1D Compatibility (HY) -3200 + (ID) 1500
Total energy: -80284.0 ( -78.94 by residue)
QMean score : 0.341
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