Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIIKPRVRGFICVTTHPAGCEANVKQQIDYVEAKGPVVNGPKKVLVIGSSTGYGLAARITAAFGS-GADTLGVFFERPGSESKPGTAGWYNSAAFEKFAHEKGLYARSINGDAFSDEVKRLTIETIKRDLGKVDLVVYSLAAPRRTHPKSGEVFSSTLKPIGKSVSFRGLDTDKEVIKDVVLEAASDQEVADTVAVMGGEDWQMWIDALLEADVL-ADGAKTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLGIRDKLAPLGGDARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKEQGTHEGCIEQVDGLYRESLYGAEPRLDEEGRLRADYKELQPEVQSRVEELWDKVTNENLYELTDFAGYKSEFLNLFGFEVAGVDYEQDVNPDVQIANLIQA |
| 1GEE Chain:A ((4-196)) | -------------------------------------DLEGKVVVITGSSTGLGKS--MAIRFATEKAKVVVNYRSKEDEANS----------VLEEI-KKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-------------HE---------------------MSLSDWNKVIDTNL-TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP--LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GEE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46631 for 1581 contacts (-29.5/contact) +
2D Compatibility (PS) -20506 + (NN) -5087 + (LL) 14012
1D Compatibility (HY) -1200 + (ID) 1500
Total energy: -60912.0 ( -38.53 by residue)
QMean score : 0.484
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