Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSMTPIARAVAFAALGSSITVPTLAHAEFIKDSKASIELRNFYFNRDFRQEGASQSKAEEWAQGFLLRYESGYTEGTIGFGVDAIGLLGVKL--DSSPDRSGTGLLKRDRETGRAQDDYGEAG-ITAKLRASKSTLKIGTLTPKLPVIMPNDSRLLPQTFQGGALNSMEIDGLTLDAGRLKKVNQRDSSDNEDMTITGGGKRNIVVRSGLTSDKFDFAGGSYKWTDNLSTSYHYGKLDNFYKQHYLGLVHTLPIADKQSLKSDIRWARSTDDGS---SNVDNKALNAMFTYSLGYHAFGVGYQKMSGDTGFAY----INGA-DPYLVNFIQIGDFANKDEKSWQARYDYNFAGVGIPGLTFMTRYVKGDNIDLLT------------TSGEGKEWERDMDIAYVFQSGPLKNLGVKWRNATMRTNY---TNDYDENRLIVSYTLPLW |
| 3SY7 Chain:A ((4-420)) | -------------------VSDQAEAKGFIEDSSLDLLLRNYYFNRD---------DRVDWTQGFLTTYESGFTQGTVGF--GVDAFGYLGLKLDGT-------------------DDYSRAGGA-VKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGVQLQSSEFEGLDLEAGHFTE----------ELYATYA---------GETAKSADFIGGRYAITDNLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTNDEGKAKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFGGAGGDSIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRANADQGEGDQNEFRLIVDYPLSIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26485 for 2724 contacts (9.7/contact) +
2D Compatibility (PS) -35779 + (NN) 1116 + (LL) 3536
1D Compatibility (HY) -23200 + (ID) 7550
Total energy: -35392.0 ( -12.99 by residue)
QMean score : ?
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