Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSHQERPLIGLLFSETGVTAD-IERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSHTRKAVMPVVERADALLCYPTPYEG-F---EYSPNIVYGGPAPNQNSAPLAAYLIRHYGERVVFIGSDYIYPRESNHVMRHLYRQHGGTVLEEIYIPLYPSDDDVQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLTTSEAEVAKMESDVAEGQVVVAPYFSSIDTAASRAFVQACHGFFPENATITAWAEAAYWQTLLLGRAAQAAGSWRVEDVQRHLYDICIDAPQGPVRVERQNNHSRLSSRIAEIDARGVFQVRWQSPEPIRPDPYVVVHNLDDWSASMGGGALP |
| 3I09 Chain:A ((2-341)) | ----ADSVKIGFITDMSGLYADIDGQGGLEAIKMAVADFG--GKVNGKPIEVVYADHQNKADIAASKAREWMDRGGLDLLVGGTNSATALSMNQVAAEKKKVYINIGAGADTLTNEQCTPYTVHYAYDTMALAKGTGSAVVKQGGKTWFFLTADYAFGKALEKNTADVVKANGGKVLGEVRHPLSA--SDFSSFLLQAQSSKAQILGLANAGGDTVNAIKAAKEFGITK-TMKLAALLMFINDVHALGLETTQGLVLTDSWYWN-RDQASRQWAQRYFAKMKKM--PSSLQAADYSSVTTYLKAVQAAGSTDSDKVMAQLKKMKIDDFYAKGYIRTDGSM-IHDMYLMEVKKP------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3I09.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -206588 for 3140 contacts (-65.8/contact) +
2D Compatibility (PS) -37229 + (NN) -23662 + (LL) 1980
1D Compatibility (HY) -6400 + (ID) 3150
Total energy: -275049.0 ( -87.60 by residue)
QMean score : 0.715
|
|
|