Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNLIEVRDLSKTFTLHQQQGVVLNVLRGLNFNVAGGECLVLHGRSGAGKSTLLRTLYGNYLPAGGSIRLRHAGDWLELVGAEPREV--LAVRRQTLGYVSQFLRVIPRVATLDVVMEPALARGWSRDSAELRARSLLARLNIPERLWQLAPGTFSGGEQQRVNIARGFMVEWPILLLDEPTASLDEANRQVVLELIGEAKAAGAALIGIFHDRAAREAVASRYLDMSQELSRQEQAHVV |
1VCI Chain:A ((31-180)) | -----------------------------LNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRI---YFGD---------RDVTYLPPKDRNISMVFQ------HMTVYENIAFPL--KKFPKDEIDKRVRWAAELLQI-EELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLD------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69119 for 853 contacts (-81.0/contact) +
2D Compatibility (PS) -14310 + (NN) -6172 + (LL) 9732
1D Compatibility (HY) -8800 + (ID) 2600
Total energy: -91269.0 ( -107.00 by residue)
QMean score : 0.369
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