Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNLIEVRDLSKTFTLHQQQGVVLNVLRGLNFNVAGGECLVLHGRSGAGKSTLLRTLYGNYLPAGGSIRLRHAGDWLELVGAEPREV--LAVRRQTLGYVSQFLRVIPRVATLDVVMEPALARGWSRDSAELRARSLLARLNIPERLWQLAPGTFSGGEQQRVNIARGFMVEWPILLLDEPTASLDEANRQVVLELIGEAKAAGAALIGIFHDRAAREAVASRYLDMSQELSRQEQAHVV
1VCI Chain:A ((31-180))-----------------------------LNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRI---YFGD---------RDVTYLPPKDRNISMVFQ------HMTVYENIAFPL--KKFPKDEIDKRVRWAAELLQI-EELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLD------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69119 for 853 contacts (-81.0/contact) +
2D Compatibility (PS) -14310 + (NN) -6172 + (LL) 9732
1D Compatibility (HY) -8800 + (ID) 2600
Total energy: -91269.0 ( -107.00 by residue)
QMean score : 0.369

(partial model without unconserved sides chains):
PDB file : Tito_1VCI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VCI-query.scw
PDB file : Tito_Scwrl_1VCI.pdb: