Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKSFRHLVQALACLALLASASLQAQESRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVPT-SWPNLMRDFADDRFDIAMSGISINLERQRQAYFSIPYLRDGKTPITLCSEEARFQTLEQIDQPGVTAIVNPGGTNEKFARANLKKARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHPE--LCAVHPQQPFDFAEKAYLLP-RDEAFKRYVDQWLHIAEQSGLLRQRMEHWLEYRWPTAHGK |
| 3MPK Chain:A ((19-251)) | -----------------------AYSAREQQWMADHPVVKVAVLNLFAPFTLFRTDEQFGGISAAVLQLLQLRTGLDFEIIGVDTVEELIAKLRSGEADMAGA-LFVNSARESFLSFSRPYVRNGMVIVTRQDPD-APVDADHLD--GRTVALVRNSAAIPLLQRRYPQAKVVTADNPSEAMLMVANGQADAVVQTQISASYYVNRYFAGKLRIASA-LDLPPAEIALATTRGQTELMSILNKALYSISN-DELASIISRWR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121430 for 1890 contacts (-64.2/contact) +
2D Compatibility (PS) -25545 + (NN) -14272 + (LL) 2956
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -166541.0 ( -88.12 by residue)
QMean score : 0.437
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