Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGVFLAIGALLPICLAGGALLGYAAVRFRVQGDPVAEQVNALLPQTQCGQCGYPGCKPYAEAIAAGDKINKCPPGGEATIRALADLLDLEPEPLDAAEETPPRVAYIREAECIGC--TKCIQACPVDAIVGAARLMHTVIADECTGCDLCLEPCPVDCI-EMREIPDDVRHWKWPQPSPRLIASDRERAA
1FRH Chain:A ((1-67))
---------------------------------------------------------------------------------------------------------AYVVTDNCIKCKYTDCVEVCPVDCFYEGPNFL-VIHPDECIDCALCEPECPAQAIFSEDEVPEDMQEF------------------
General information:
TITO was launched using:
RESULT:
Template:
1FRH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59801 for 403 contacts (-148.4/contact) +
2D Compatibility (PS) -6554 + (NN) -3560 + (LL) 6836
1D Compatibility (HY) -7200 + (ID) 1150
Total energy: -71429.0 ( -177.24 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_1FRH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FRH-query.scw
PDB file :
Tito_Scwrl_1FRH.pdb
: