Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMDINEIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGILGFKML---DVKPADGTLYYFVGSDKLRFRQPVLPGDQLQLHAKFISVKRSIWKFDCHATVDDKPVCSAEI--ICAERKL
3ED0 Chain:E ((14-159))
---IEHILQILPHRYPMLLVDRITELQ-ANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAERE-
General information:
TITO was launched using:
RESULT:
Template:
3ED0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115026 for 1047 contacts (-109.9/contact) +
2D Compatibility (PS) -15251 + (NN) -6738 + (LL) 720
1D Compatibility (HY) -16800 + (ID) 3550
Total energy: -156645.0 ( -149.61 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_3ED0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ED0-query.scw
PDB file :
Tito_Scwrl_3ED0.pdb
: