Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRRTAFFFDELCLWHAAGPHALTLPVGGWVQPPAAAGHAESPETKRRLKSLLDVSGLTARLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSLGQDAPIGPGSYEIARLSAGLAIAALDAVLAGEADNAYSLSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQ--DGCFPPGYSGAEDIGEDRGRGFNLNVP----LLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDA--NAVDPLARMQLHSDSFRAMTAMVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRSAVRDPLRDFIELQQPNA-AFRDFQRQRLEELAAQFGLCPAQPLQAAR
2VQO Chain:B ((127-386))---------------------------------------------------------------------------------------------------------------ARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGL----AGGRIVLALEGGYDLTAICDASEACVSALLGNE---LDPLPEKVLQQRPNANAVRSM--EKVMEIHSKYWRC---------


General information:
TITO was launched using:
RESULT:

Template: 2VQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168242 for 2202 contacts (-76.4/contact) +
2D Compatibility (PS) -27985 + (NN) -20354 + (LL) 7336
1D Compatibility (HY) -18400 + (ID) 4750
Total energy: -232395.0 ( -105.54 by residue)
QMean score : 0.534

(partial model without unconserved sides chains):
PDB file : Tito_2VQO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VQO-query.scw
PDB file : Tito_Scwrl_2VQO.pdb: