Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPRTLAFVSTLLLAAFCALPAQADSFIMRLLNKPVPGGVAVVDLGEEGPPPRAFYQGKPVLVVREEGRRWIAVVGIPLSTKPGPQKLEVRAATGNHEERFSVGSKHYREQRITLKNKRQVNPLPEDLKRIERELAEQTAAYRRFSPGLPSNLMLDKPVDG-PLSSPFGLRRFFNGEERNPHSGLDFAVPAGTPIKAPAAGKVILIGDYFFNGKTVFVDHGQGFISMFCHLSKIDVKLGQQVPRGGVLGKVGATGRATGPHMHWNVSLNDARVDPAIFIGAFQP |
3SLU Chain:A ((218-345)) | --------------------------------------------------------------------------------------------------------------------------------------------------------FNIEPLVYTRISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHANGVETLYAHLSAFSQA-QGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVALPT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51161 for 956 contacts (-53.5/contact) +
2D Compatibility (PS) -13372 + (NN) -4527 + (LL) 9940
1D Compatibility (HY) -4400 + (ID) 2150
Total energy: -65670.0 ( -68.69 by residue)
QMean score : 0.418
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