Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKAPQPEVVATASRQNPGETLRQAREQKGLSLSQVAGQLNLTENSLRQLENGAFDKLPGHTFSRGYIRAYAKLMGLDQAELVNSFDHFTGTNASGSTVQSLGRVAEPVRLSRNVLRIVSLLLLALLIGFGYFWWQEHSARTPETAGLSLEHVEVESADGTTEIHTLDEPEDQAVIEAQKEGEQAPAEVSPEVAAQAEGAPPVASEGAQVPAAPAQGTPAAPQQPVTAAPAGTAPAPGTAPAVPATASPAAPPAPSEPAAAPVVAGEGQGVVKVQFVADCWTQVTDANGKVLVSALKRKGDSLELAGKAPLELRLGFARGAQVSYNGQPVDVTPFVRGETARLKVGQ |
| 3OP9 Chain:A ((7-76)) | --------------QHQFAENLSRLKKEHGLKNHQIAELLNVQTRTVAYYMSGETK--PDI----EKLIRLATYFHLSIDELVGYVQE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9874 for 445 contacts (-22.2/contact) +
2D Compatibility (PS) -7260 + (NN) -786 + (LL) 16980
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -6490.0 ( -14.58 by residue)
QMean score : 0.753
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