Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKPCHFAQFDLQPAFLVDLDELGQRYRELVRSVHPDRFADAPEREQRLALERAAQLNEAYQTLKSAPRRALYLLTLSGHELPLEATVQDPEFLLQQMQLREELEELQDSADLAGVATFKRRLKAAQAELEREFAACWDDAQRREEAERLVRRMQFLDKLAQEVRQLEERLDD
2CTW Chain:A ((15-81))
-SGESLYHVLGLDKN--ATSDDIKKSYRKLALKYHPDKNPDNP-----EAADKFKEINNAHAILTDATKRNIYDK--------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21833 for 404 contacts (-54.0/contact) +
2D Compatibility (PS) -7420 + (NN) -6282 + (LL) 10580
1D Compatibility (HY) -400 + (ID) 850
Total energy: -26205.0 ( -64.86 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_2CTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CTW-query.scw
PDB file :
Tito_Scwrl_2CTW.pdb
: