Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIEKHNIKLATFIAALFYDLSTQKQVRIPTQIEKRDRELYELVKKSKRPVALLVDETHDLNGHTLTGLKRLLELAEDDSGRRRLSIVLAGHPKLCNDLR-------RPTMEEIGYRTDIFELQEKMQSAGLPV
2C9O Chain:A ((295-368))
------------------------------------------------VPGVLFVDEVHMLDIECFTYLHRALESS---IA--P-IVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTP------
General information:
TITO was launched using:
RESULT:
Template:
2C9O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19069 for 357 contacts (-53.4/contact) +
2D Compatibility (PS) -6888 + (NN) -1405 + (LL) 5312
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -24850.0 ( -69.61 by residue)
QMean score : 0.194
(partial model without unconserved sides chains):
PDB file :
Tito_2C9O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C9O-query.scw
PDB file :
Tito_Scwrl_2C9O.pdb
: