Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSALQPSRSYRITGYSPAISNGYRQRLFSMGLLPGAALRVVRIAPLGDPIQVETRQTSLALRRKDLALLTLVPLD-
2GCX Chain:A ((1-75))
-MQFTPDSAWKITGFSRDISPAYRQKLLSLGMLPGSSFHVVRVAPLGDPVHIETRRVSLVLRKKDLALIELEAVAQ
General information:
TITO was launched using:
RESULT:
Template:
2GCX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49106 for 457 contacts (-107.5/contact) +
2D Compatibility (PS) -7713 + (NN) 431 + (LL) 208
1D Compatibility (HY) -9600 + (ID) 1900
Total energy: -67680.0 ( -148.10 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_2GCX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GCX-query.scw
PDB file :
Tito_Scwrl_2GCX.pdb
: