Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFRPRLLLTSLAIALGACSPQDPQAVTSAALAQQ-----VILPTYSRWVEA---DQALASSALAYCQGKEDLAKARDAFHAAQKAWAELQPLLIGPLAEGNRAWQVQFWPDKKDLVGRQVEQLLKNNPQVDAAALAKASVVVQGLSAYEYILFDSKIDLADAATKARYCPL---------LEAIGTHQQQLAQDILARWKNDGGMLTQMSKFPNDRYADAHEAIAELLRVQVTALDMLKKKLGTPLGRQSKGIPQPYQAEAWRSNASLASLDASLSGAQALWEGIDGKGLKTLLPAEQKDLAGKIDAAYADSHAK--------LAALEQKPLSELLASEDGRNQLNAL----YDSLNVVHRLHEGDLARALGVQLGFNANDGD---------------------------------------- |
| 2YHG Chain:A ((27-437)) | -GRYRVIHTTDMGA----DPDDEQSLVRQLVMANEYDLEGIITTTGCWKKSTSNTAYVDRILNAYSQAYPNLSKHAEGFPTPAYLDSINVM---GQRGYGMGDVGSGKDSAGSNLIIAAVDK--DDPRPVWATCWGGCNTIAQAVWKVQNT--RSQAQLDAFISKLRVYDILGQDNAGTWLAKNFPNLIYIRARSVYSWQPSDSYLDNHIQSHGALGAVYPNRRYATEGDTPAFLHMANPGLNDPSVVSMGGWGGRFPSKQAGVRGMSCMSGEDAVYDTYYMYTENGESIKRWSTAIHNDFQARMDWAIESNYSAANHHPVPVVNNDANEAVMYLNASAGSTVSLDASGSSDPDGDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSNAGGKDIHILLTLRDNGSPNLYAYRRVVINVQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12579 for 2728 contacts (4.6/contact) +
2D Compatibility (PS) -35108 + (NN) -778 + (LL) 1628
1D Compatibility (HY) -2000 + (ID) 2450
Total energy: -26129.0 ( -9.58 by residue)
QMean score : 0.089
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