Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGK----GL-KSLVKAPLELL-KSLFQALRVIRQLRPVCVLGLGGYVT-GPGGLAARLNGVPLVIHEQNAVA----------G-T-----------ANRSLA-------------PIARRVCEAFPDTFPA----SDKRLTTGNPVRGELFLDAHA--RAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVARG |
| 3H4T Chain:A ((2-389)) | ---GVLITGCGSRGDTEPLVALAARLRELGADARMCLPPD--YVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVAEWFDKVPAAIE--GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPDQRPLSAELEGFLRAGSPPVYVGFGSGPAP--A-EAARVAIEAVRA-QGRRVVLSSGWAGLGRI----D-EGDDCLVVGEVNH-QVLFGRVAAVVHHGGAGTTTAVTRAGAPQVVVPQ----KADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT-PGIRARAAAVAGTIRT-DGTTVAAKLLLEAIS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161913 for 2990 contacts (-54.2/contact) +
2D Compatibility (PS) -35692 + (NN) -12471 + (LL) 1100
1D Compatibility (HY) 4000 + (ID) 2800
Total energy: -207776.0 ( -69.49 by residue)
QMean score : 0.508
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