Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MALERSDVEKIAHLARLGLSEADLPRTTETLNNILGLIDQMQAVDTSGVEP----LAHPLEATQRLRPDAVTETDHRDAYQTIAPAVEEGLYLVPKVIES---
1NLX Chain:A ((4-107))
ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV
General information:
TITO was launched using:
RESULT:
Template:
1NLX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22739 for 657 contacts (-34.6/contact) +
2D Compatibility (PS) -10357 + (NN) -3950 + (LL) 0
1D Compatibility (HY) 400 + (ID) 550
Total energy: -37196.0 ( -56.61 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_1NLX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NLX-query.scw
PDB file :
Tito_Scwrl_1NLX.pdb
: