Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQRVYVALGSNLAEPREQIQAALDAFERLPETRLVAVSPLYISDPLGPADQPRFVNGVAALDTNLAPLDLLDALQAIELEQGRVRDL-RWGPRTLDLDILLFGEQLLDLPRLKVPHYHMQARAFVLYPLADLAPDLRLPDGRHLPELLAACPFEGIERLPGA
1F9H Chain:A ((4-157))
-----YIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPATLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNK----
General information:
TITO was launched using:
RESULT:
Template:
1F9H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100717 for 1162 contacts (-86.7/contact) +
2D Compatibility (PS) -16349 + (NN) -10498 + (LL) 832
1D Compatibility (HY) -16800 + (ID) 3900
Total energy: -147432.0 ( -126.88 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_1F9H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F9H-query.scw
PDB file :
Tito_Scwrl_1F9H.pdb
: