Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRRKTAVPRNAGAVLPMLACLAAQAAEGGFLEDAKTDLVLRNYYFNRDFRDHDAGKSLVDEWAQGFILKFSSGYTPGTVGVGLDAIGLFGVK--LNSGRGTSNSELLPLHDDGRAADNYGRVG-VAAKLRVSASELKIGEMLPDIPLLRYDDGRLLPQTFRGFAVVSRELPGLALQAGRFDAVSLRNSADMQDLSAWSAPTQKSDGFNYAGAEYRFNRERTQLGLWHGQLEDVYRQSYANLLHKQRVGD-WTLGANLGLFVDRDDGAARAGEIDSHTVYGLFSAGIGLHTFYLGLQKVGGDSGWQS----VYGSSGRSMGNDMFNGNFTNADERSWQVRYDYDFVGLGWPGLIGMVRYGHGSNATTKA-------------GSGGKEWERDVELGYTVQSGPLARLNVRLNHASNRRSF---NSDFDQTRLVVSYPLSW |
| 3SY7 Chain:A ((3-419)) | ---------------------FVSDQAEAKGFIEDSSLDLLLRNYYFNRD---------DRVDWTQGFLTTYESGFTQGTVGF--GVDAFGYLGLKLDGT------------------DDYSRAGGA-VKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGVQLQSSEFEGLDLEAGHFTE----------ELYATY-AGETAKSADFIGGRYAIT-DNLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTNDEGKAKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFGGAGGDSIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRANADQGEGDQNEFRLIVDYPLSI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9060 for 2763 contacts (3.3/contact) +
2D Compatibility (PS) -36767 + (NN) -2578 + (LL) 3576
1D Compatibility (HY) -19600 + (ID) 6500
Total energy: -52809.0 ( -19.11 by residue)
QMean score : 0.213
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